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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs12322796 chr12:132575289 G/T 3.4E-7 67 31.83 23.25 0.73 KM Plot
UVM rs12366653 chr12:9811832 C/T 0.000112 67 27.62 21.8 7.6 KM Plot
UVM rs12401623 chr1:114737170 G/A 0.000143 64 31.55 21.27 7.6 KM Plot
UVM rs12403052 chr1:114746872 G/A 0.000102 67 27.93 24.43 7.6 KM Plot
UVM rs12410814 chr1:114737379 T/C 0.000143 64 31.55 21.27 7.6 KM Plot
UVM rs12410815 chr1:114737387 T/C 0.000143 64 31.55 21.27 7.6 KM Plot
UVM rs12423631 chr12:132606886 C/T 6.93E-7 65 27.93 23.87 0.73 KM Plot
UVM rs12424892 chr12:132623389 G/C 4.29E-7 67 27.92 24.87 0.73 KM Plot
UVM rs12440291 chr15:29419270 G/A 8.47E-5 66 25.32 41.87 7.6 KM Plot
UVM rs12479255 chr2:239026527 T/C 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs12479946 chr20:30284409 T/C 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs12480305 chr20:30408435 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs12480322 chr20:30436641 G/C 7.5E-5 66 27.92 22.87 7.6 KM Plot
UVM rs12480325 chr20:30436666 G/A 7.5E-5 66 27.92 22.87 7.6 KM Plot
UVM rs12480630 chr20:30283612 C/T 0.000118 67 27.92 8.18 7.6 KM Plot